File Format Description

Each off-target data file contains comprehensive genomic context annotations to help assess potential functional impacts:

Column 1-2:
Off-target genomic position (chromosome, coordinates)
Column 3:
Original sgRNA sequence
Column 4:
Off-target sequence with mismatches highlighted
Column 5:
Number of mismatches between sgRNA and off-target
Column 6:
Dataset identifier
Column 7-8:
Genomic annotation details (gene features, CDS, UTR, introns)
Important: All off-target sites are computational predictions requiring experimental validation for confirmation.

Plant Species Off-target Data

PCdb provides unrestricted access to all curated data through comprehensive download options. Our download portal offers standardized datasets including sgRNA collections, genome-wide off-target predictions, and statistical summaries. File sizes range from 220 KB to over 450 MB depending on genome complexity. All datasets are provided in standardized formats for easy integration into research workflows.

TypeDownloadSize
Off-target Info - Arabidopsis thaliana Off_target_information in Arabidopsis thaliana.txt 374 KB
Off-target Info - Zea mays Off-target Information in Zea mays.txt 8.96 MB
Off-target Infor - Gossypium hirsutum Off-target Information in Gossypium hirsutum.txt 385 KB
Off-target Info - Solanum tuberosum Off-target Information in Solanum tuberosum.txt 111.66 MB
Off-target Info - Oryza sativa Off-target Information in Oryza sativa.txt 7.83 MB
Off-target Info - Solanum lycopersicum Off-target Information in Solanum lycopersicum.txt 454.90 MB
Off-target Info - Triticum aestivum Off-target Information in Triticum aestivum.txt 20.17 MB
Off-target Info - Glycine max Off-target Information in Glycine max.txt 1.92 MB
Off-target Info - Brassica napus Off-target Information in Brassica napus.txt 220 KB