PubMed 26962325

PubMed ID: 26962325

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A simple test for the cleavage activity of customized endonucleases in plants.
Authors: Budhagatapalli Nagaveni, Schedel Sindy, Gurushidze Maia, Pencs Stefanie, Hiekel Stefan, Rutten Twan, Kusch Stefan, Morbitzer Robert, Lahaye Thomas, Panstruga Ralph, Kumlehn Jochen, Hensel Goetz
Journal: Plant methods (Plant Methods), Vol.12(), 2016

DOI: 10.1007/s001220051585 PMCID: PMC2699555

Abstract
Although customized endonucleases [transcription activator-like effector nucleases (TALENs) and RNA-guided endonucleases (RGENs)] are known to be effective agents of mutagenesis in various host plants, newly designed endonuclease constructs require some pre-validation with respect to functionality before investing in the creation of stable transgenic plants.

A simple, biolistics-based leaf epidermis transient expression test has been developed, based on reconstituting the translational reading frame of a mutated, non-functional yfp reporter gene. Quantification of mutation efficacy was made possible by co-bombarding the explant with a constitutive mCherry expression cassette, thereby allowing the ratio between the number of red and yellow fluorescing cells to serve as a metric for mutation efficiency. Challenging either stable mutant alleles of a compromised version of gfp in tobacco and barley or the barley MLO gene with TALENs/RGENs confirmed the capacity to induce site-directed mutations.

A convenient procedure to assay the cleavage activity of customized endonucleases has been established. The system is independent of the endonuclease platform and operates in both di- and monocotyledonous hosts. It not only enables the validation of a TALEN/RGEN's functionality prior to the creation of stable mutants, but also serves as a suitable tool to optimize the design of endonuclease constructs.
Publication Types
Journal Article
Keywords
Biolistic gene transfer RNA-guided endonucleases Site-directed mutagenesis Transcription activator-like effector nucleases Transient expression
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