PubMed 31349852

PubMed ID: 31349852

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Modulating chromatin accessibility by transactivation and targeting proximal dsgRNAs enhances Cas9 editing efficiency in vivo.
Authors: Liu Guanwen, Yin Kangquan, Zhang Qianwei, Gao Caixia, Qiu Jin-Long
Journal: Genome biology (Genome Biol), Vol.20(1), 2019‑Jul‑26

DOI: 10.1016/j.cell.2016.05.050 PMCID: PMC6660936

Abstract
The CRISPR/Cas9 system is unable to edit all targetable genomic sites with full efficiency in vivo. We show that Cas9-mediated editing is more efficient in open chromatin regions than in closed chromatin regions in rice. A construct (Cas9-TV) formed by fusing a synthetic transcription activation domain to Cas9 edits target sites more efficiently, even in closed chromatin regions. Moreover, combining Cas9-TV with a proximally binding dead sgRNA (dsgRNA) further improves editing efficiency up to several folds. The use of Cas9-TV/dsgRNA thus provides a novel strategy for obtaining efficient genome editing in vivo, especially at nuclease-refractory target sites.
Publication Types
Journal Article Research Support, Non-U.S. Gov't
Keywords
CRISPR/Cas9 Chromatin accessibility Proximal dsgRNA Transcription activation domain
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